Preparations for lecture on Pathway Analysis

As a preparation for the Pathway Analysis convocation, make yourself acquainted with the material below, and subsequently complete any tasks assigned to you in canvas.

1. Watch the Video Lecture on Pathway Analysis, and its slides
2. Read Subramanian et al, Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles. Feel free to skip the “Results” section of the paper.
3. Execute the example code in the jupyter notebook

Additional Material:

1. The reactome database